Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906829.1_cds_XP_016457010.1_50784
CDS Infomation

[gene=LOC107780908] [db_xref=GeneID:107780908] [protein=photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like] [protein_id=XP_016457010.1] [location=join(34964..35554,36096..36286,36365..36622,36718..36823,37128..37213,37577..37742)] [gbkey=CDS]
Sequence

ATGGCTACAACTAGTCTAATGCCTAAGTTCATTTCTCATTTTCTTACTAGCCCACCTTCT
TTTCCTATAACCCATGTCACAAATGTACCTTTCTTGATTAAAAATCCATTGGATAACACA
TTTTGTGCCAGAAAATCAGGGAGTTTTCGGCCCAATGCTAAGAAGAAAAATCCATGGCTT
GACCCTTTTGACTATGGTGAGGACCCTGAAATGGAGTATGGTTCACTTTTTTCTGATGGT
AAACAAGATGAGGATCCAAGGCCACCTGATAATCCCGATAATCCATACGGATTCCTCAAA
TTCCCAATGGGATACTCTGTCGAAATTGCTTCTTTGGGTTTGAAAATTAGAGGTGATGTT
AGGAGATGTTGTTGTGTAATTGATGGAGGAGTTTATGAGAATTTGCTGTTTTTCCCAACA
ATTCAGATGATTAAGGATAGGTACCCTGGCGTTCAAGTGGATATCTTAGCAACGCCTAGG
GGAAAACAGACTTTTGAGCTGAACAAAAATGTGAGGTGGGCTAATGCCTATGATTTGGAT
GATGATTTCCCTGAACCTGCAGAGTACACAGATATGGTTGGAATTCTTAAGAGTAGGTAC
TATGATATGATCTTGTCAACCAAACTGGCAGGGATTGGACATGCAGTATTCTTGTTTATG
TCAACTGCCCGCGACAGAGTTAGCTATATTTACCCAAATGTGAATTCTGCAGGAGCAGGA
TTATTTCTATCAGAAACTTTTACACCAGAAAGCATGAATCTTTCCGATGGCGGATACCAT
ATGTATCGTCAGATGGTTGATTGGTTAGGCAGACCAGCTCGTAAAGTACCACGACAACCT
TTACCCCCACTTAAAATTTCAATCTCAAGAAAGATTAGGGATGTTGTAGAGGCAAAATAT
AAGAATGCTGGTGCACAGAGAGGAAAATATATTGTAATTCATGGGATAAAATCAGATTCC
AAAGCTTCTATGCAGTCGAGGGGCGATGCTGATAGCTTGCTTCCAGTTGAGATTTGGGCC
GAGATAGCAGAAGAGATTAGGGGAATTAAGCCGGTTTTTGTCATTCCCCATGAGAAAGAA
AGAGAAAATGTGGAAGATGCAGTTGGTTTAGATGCTAGTATAGTGTTCATAACCACTCCT
GGACAGCTTGCTGCTCTTATTGATGACTCTGCTGGAGTGATAGCTACAAATACAGCTGCC
ATACAACTTGCTCATGCGCGTGGAAAGCCAAGTGTTGGGCTATTCTGTTCTGAGGATAAG
GCCAGAAGTTTTGTTCCCAATGCAGAAGAAAAGAAATGTGCAACCATTTCATCAAAGACA
GGAAAATTGGTAGATATCGATGTTGAAGCTGTGAAAAGCGCAGTCCAAATTTTCACCATG
CCCCTAGCAATCTTCTAA

Peptide Sequence

PEP ID

XP_016457010.1
PEP Infomation

PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MATTSLMPKFISHFLTSPPSFPITHVTNVPFLIKNPLDNTFCARKSGSFRPNAKKKNPWL
DPFDYGEDPEMEYGSLFSDGKQDEDPRPPDNPDNPYGFLKFPMGYSVEIASLGLKIRGDV
RRCCCVIDGGVYENLLFFPTIQMIKDRYPGVQVDILATPRGKQTFELNKNVRWANAYDLD
DDFPEPAEYTDMVGILKSRYYDMILSTKLAGIGHAVFLFMSTARDRVSYIYPNVNSAGAG
LFLSETFTPESMNLSDGGYHMYRQMVDWLGRPARKVPRQPLPPLKISISRKIRDVVEAKY
KNAGAQRGKYIVIHGIKSDSKASMQSRGDADSLLPVEIWAEIAEEIRGIKPVFVIPHEKE
RENVEDAVGLDASIVFITTPGQLAALIDDSAGVIATNTAAIQLAHARGKPSVGLFCSEDK
ARSFVPNAEEKKCATISSKTGKLVDIDVEAVKSAVQIFTMPLAIF

Transcript Sequence

Gene sequence data has not been registered.